Wednesday, 23 September 2015

Index the web with AWS CloudSearch

Introduction

Search is more than ever a commodity. Not only can we use great open source solutions such as Apache SOLR or ElasticSearch to index collections of documents, but we can also let others take care of the management of the software and resources and treat search as a service. Amazon provide such a functionality with CloudSearch, their SOLR-based search service.


In this tutorial, I will show how to index the content of web sites into AWS CloudSearch using two open source web crawlers : Apache Nutch and StormCrawler. We will go through a very simple, single site setup to get familiar with these projects and understand how they differ from each other. As an example of how a company could crawl its own website, we will crawl http://www.tescobank.com/. It will be relatively easy to adapt the resources for your own needs should you need to.


This is merely an introduction to Nutch, StormCrawler and web crawling in general. Please refer to their respective documentations for more details. The instructions you will find below are based on Linux command lines and tools.

NOTE : STORMCRAWLER HAS EVOLVED A LOT SINCE THIS POST WAS ORIGINALLY PUBLISHED - HAVE A LOOK AT THIS POST FOR A MORE UP TO DATE WAY OF BOOTSTRAPPING THE PROJECT.

Apache Nutch

Presentation
Apache Nutch is a popular open source web crawler which has been around for over a decade. Nutch was originally designed by Doug Cutting (who also created Apache Lucene) and Mike Cafarella. The project has a special place in the history of Big Data as Apache Hadoop (see History of Hadoop) among other things was borne out of it. The project is still active and is used by many companies and researchers.

There are several open source crawlers available, however Nutch is one of the very few which can handle data at very large scale (thanks to Hadoop). Some of our customers have used it for multi-billion pages web crawls, as does the CommonCrawl project. However, a survey of Nutch users conducted some time ago found that most users run it on a single machine (and less than a million URL) just as we will do in this tutorial. Nutch is an attractive proposition not only because of its scalability but also for smaller crawls because of the features it offers and the fact that it can be customised via a plugins.


Since Nutch is based on Hadoop, it operates as a sequence of batch jobs implemented with MapReduce with the data being stored on HDFS. This makes the crawler robust and fault tolerant. Moreover, Nutch can run on platforms such as ElasticMapReduce straight out of the box as explained on this video tutorial.


Apache Nutch comes in two flavours : 1.x and 2.x. The latter leverages a storage abstraction layer named Apache GORA which allows to store the data in NoSQL databases such as HBase or Cassandra whereas the former uses standard Hadoop data structures on HDFS. This tutorial is based on Nutch 1.11 which contains a plugin for CloudSearch (see  https://issues.apache.org/jira/browse/NUTCH-1517).


Nutch is complex and feature-rich. Again, this tutorial is just an introduction: please refer to the documentation for more details.

Prerequisites



The instructions below are based on a Linux distribution. You will need to install the following softwares :


You will also need an AWS account and configure the credentials for it by editing the files ~/.aws/credentials and ~/.aws/config, as explained in the AWS documentation (see  [http://docs.aws.amazon.com/cli/latest/userguide/cli-chap-getting-started.html] for details).

Installation


First download the 1.11 release from http://www.apache.org/dyn/closer.lua/nutch/1.11/apache-nutch-1.11-src.zip, unzip it and cd to it. We will refer to this location as $NUTCH_HOME from now on. We then compile Nutch with the command :


`ant clean runtime`


if the command runs successfully, you should find that a new directory ‘runtime’ has been created in $NUTCH_HOME, which contains two subdirectories local and deploy. The latter is used when running on a Hadoop cluster or in pseudo-distributed mode and contains only a large jar file with all the classes, configuration files and dependencies as well as the shell scripts for running the crawls. As we are running in local mode for this tutorial, we will use the former i.e. runtime/local.

CloudSearch setup



Before launching the Nutch crawl, we need to define a domain for CloudSearch. We can use the script provided in the CloudSearch plugin :


`chmod a+x $NUTCH_HOME/src/plugin/indexer-cloudsearch/createCSDomain.sh`


`$NUTCH_HOME/src/plugin/indexer-cloudsearch/createCSDomain.sh nutch-tescobank`


You can then use the AWS console [https://aws.amazon.com/cloudsearch/] to check that the domain has been successfully created. If it has not, please check that you configured your credentials correctly.


The domain should become available after some time. Please take note of the value of the Document Endpoint which you will need to specify in the configuration below.


This script above has created a number of fields for indexing the documents crawled with Nutch into CloudSearch. Here is how the CloudSearch console displays the indexing options:


index-nutch-tescobank.jpg
CloudSearch indexing options for Nutch 


These fields can of course be modified to suit the needs of your crawl. Please note that the CloudSearch plugin first retrieves the list of fields that are defined for a domain and will ignore any field in the Nutch documents at indexing time if they are not defined in the domain.

Nutch Configuration



Nutch is configured by a set of files located in the conf directory. The main file is nutch-site.xml. Do not edit nutch-default.xml : as its name suggests, it defines the default values for the configuration and it is good practice to leave this file as-is and simply use nutch-site.xml which overrides it.


Please edit the file $NUTCH_HOME/runtime/local/conf/nutch-site.xml with the following content :


<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="configuration.xsl"?>

<!-- Put site-specific property overrides in this file. -->

<configuration>

<property>
 <name>http.agent.name</name>
 <value>TescoBankCrawler</value>
</property>

<property>
 <name>http.agent.email</name>
 <value>crawler@mycompany.com</value>
</property>

<property>
 <name>fetcher.server.delay</name>
 <value>2.0</value>
</property>

<property>
 <name>http.content.limit</name>
 <value>-1</value>
</property>

<property>
 <name>db.max.outlinks.per.page</name>
 <value>-1</value>
</property>

<property>
 <name>db.ignore.external.links</name>
 <value>true</value>
</property>

<property>
 <name>plugin.includes</name>
<value>protocol-http|urlfilter-regex|parse-(html|tika)|index-basic|indexer-cloudsearch|scoring-depth|urlnormalizer-(pass|regex|basic)</value>
</property>

<property>
 <name>cloudsearch.region</name>
 <value>ENTER.REGION.HERE</value>
</property>

<property>
 <name>cloudsearch.endpoint</name>
<value>ENTER.ENDPOINT.HERE</value>
</property>

<property>
 <name>cloudsearch.batch.maxSize</name>
 <value>100</value>
</property>

</configuration>


These properties are fairly straightforward: you can find a description of what they do in nutch-default.xml as well as additional ones.


http.agent.* : defines how the crawler identifies itself in the http headers. It is mandatory to specify these and will allow webmasters to identify your crawler in their logs.


fetcher.server.delay : determines how frequently the fetcher will send requests to a given host. We will be using a value of 2 seconds between requests.


http.content.limit : we do not want to trim the content of the documents and set -1 to that effect.


db.max.outlinks.per.page : we do not want to limit the number of outlinks found in the pages.


db.ignore.external.links : setting the value to true will guarantee that the crawl stays within the same hostname as the seed URLs, in our case tescobank.com. This is a simple way of controlling the expansion of the crawl.


plugin.includes : lists the plugins to use for the crawl, in particular this is where we want to specify that we will use the cloudsearch plugin for indexing (indexer-cloudsearch).


cloudsearch.* : this is where we define the domain endpoint and region.


cloudsearch.batch.maxSize : maximum number of documents to send as a batch to CloudSearch.


URL filtering and normalization



We have already restricted the scope of the crawl with the db.ignore.external.links parameter. We will now go further and will also edit the URL filters to prevent https URLs to be crawled. This is done by editing the file conf/regex-urlfilters.txt and adding https to the first regular expression and commenting out the third regexp as shown below.



# skip file: ftp: and mailto: urls
-^(file|ftp|mailto|https):

# skip image and other suffixes we can't yet parse
# for a more extensive coverage use the urlfilter-suffix plugin
-\.(gif|GIF|jpg|JPG|png|PNG|ico|ICO|css|CSS|sit|SIT|eps|EPS|wmf|WMF|zip|ZIP|
ppt|PPT|mpg|MPG|xls|XLS|gz|GZ|rpm|RPM|tgz|TGZ|mov|MOV|exe|EXE|jpeg|JPEG|
bmp|BMP|js|JS)$

# skip URLs containing certain characters as probable queries, etc.
# -[?*!@=]

# skip URLs with slash-delimited segment that repeats 3+ times, to break loops
-.*(/[^/]+)/[^/]+\1/[^/]+\1/

# accept anything else
+.


We will also add a normalisation rule so that any parameters in a URL would get removed. We do that by adding the following snippet to regex-normalize.xml :


<!-- removes parameters from URL -->
<regex>
 <pattern>\?.+</pattern>
 <substitution></substitution>
</regex>


Doing so will optimise the crawl process by avoiding to fetch duplicate URLs e.g.




and




would both be normalised to single URL


It would also prevent .css or .js URLs to be included as the regular expression in the url filter file above would not match if these URLs has a query part.


Of course normalising the URLs in this way is not necessarily the right thing to do for all the crawls. It just happens to be useful for this particular web site (and is also a good way of introducing URL normalisation).

Running the crawl



We need to give a crawler somewhere to start. Let’s create a directory where the output of the crawl will be stored with :


`mkdir ~/tescobank`


and create a seed file with


`echo http://www.tescobank.com/ > ~/tescobank/seed`


A seed file is simply a list of URLs to use as starting points for the crawl. In our case we will use the root URL of the TescoBank website.


We can now move to ‘runtime/local/bin’ and use the shell scripts. The script ‘nutch’ allows to run individual operations and steps whereas `crawl` combines these individual operations for a standard crawl run. You can of course modify its content to remove or add specific steps.


Let’s first check that we got the configuration right. The command


./nutch indexchecker "http://www.tescobank.com"


should return something similar to this :


fetching: http://www.tescobank.com
robots.txt whitelist not configured.
parsing: http://www.tescobank.com
contentType: application/xhtml+xml
tstamp : Thu Aug 27 11:39:39 BST 2015
digest : e267f9dd6bfcf0a6ae27f2848ae5016d
host : www.tescobank.com
id : http://www.tescobank.com
title : Tesco Bank - Personal Finance - Banking and Insurance
url : http://www.tescobank.com
content : Tesco Bank - Personal Finance - Banking and Insurance skip to content Our website works better with


What this command does is that it simulates the crawl process on a single URL which is useful for checking the configuration and metadata extraction. This is the equivalent of calling the fetch, parse and index steps on a URL. The output is a list of named fields (contentType, tstamp etc...) which will be sent to CloudSearch as a representation of the document.


You have probably recognised the field names we created in the cloudsearch domain. There are actually two more fields (boost, segment) which are generated by the crawl steps and not by the indexchecker command.


We are now ready to run the crawl. We could call the individual steps one by one but it is far easier to use the all-in-one crawl script e.g.


./crawl --index ~/tescobank/seed ~/tescobank -1


where we indicate that we want to index the documents and use the seed file created earlier. The output will be located in ~/tescobank/. The last parameter is the number of rounds of crawling, a value of -1 will simply keep iterating on the generate-fetch-parse-update steps until there aren’t any URL eligible for fetching left.


The console will display the individual Nutch commands as well as the logs. You can inspect the log files in runtime/local/logs/hadoop.log for debugging. Once the crawl is complete, you should be able to query and retrieve documents from CloudSearch. 

The monitoring section for the CloudSearch UI should look like the picture below, where I added the beginning and end of each crawl iteration.


indexNutch.png
Timeline of Nutch indexing 

Output description



If you now have a look at the content of the ~/tescobank directory which we gave as parameter to the crawl script, you should see something similar to this :


├── crawldb
├── linkdb
├── seed
└── segments
   ├── 20150904152610
   ├── 20150904152646
   ├── 20150904153259
   └── 20150904155447


The seed file is the one we created earlier and contains the URLs to use as starting point for the crawl. The linkdb directory can be ignored for the purpose of this tutorial. It is a data structure containing the relations between URLs which can be used to index the anchor text of the links pointing to a given URL. By default links within the same host are ignored, which is why this structure is empty.


The crawldb directory should contain a current/part-00000. The name of this file is probably puzzling but bear in mind that Nutch runs on Hadoop with the data stored in a distributed fashion on HDFS. Roughly speaking each distributed task will generate a part of the data, this part would then be replicated across the HDFS data nodes.


The crawldb is a key data structure of Nutch. It contains all the information we have about a webpage, such as its URL, metadata, status, when it is next due for fetching etc… Since the content of the file is a serialisation of the Java objects in a Hadoop datastructure (call a SequenceFile) you can’t read these files directly. Instead Nutch provides a number of tools for displaying the content of these files.


The most commonly used one is readdb :


./nutch readdb ~/tescobank/crawldb/ -url "http://www.tescobank.com/security/index.html"


URL: http://www.tescobank.com/security/index.html
Version: 7
Status: 2 (db_fetched)
Fetch time: Sun Oct 04 15:30:42 BST 2015
Modified time: Thu Jan 01 01:00:00 GMT 1970
Retries since fetch: 0
Retry interval: 2592000 seconds (30 days)
Score: 0.0
Signature: c7eb5707561c7c498020d3b553df19f2
Metadata:
_depth_=2
_pst_=success(1), lastModified=0
_rs_=1761
Content-Type=application/xhtml+xml
_maxdepth_=1000


This particular command displays the content of a particular entry in the crawldb. The same readdb command can also be used to get statistics about the crawldb :


./nutch readdb ~/tescobank/crawldb/ -stats


CrawlDb statistics start: /home/pebble/tescobank/crawldb/
Statistics for CrawlDb: /home/pebble/tescobank/crawldb/
TOTAL urls: 504
retry 0: 503
retry 1: 1
min score: 0.0
avg score: 0.001984127
max score: 1.0
status 1 (db_unfetched): 1
status 2 (db_fetched): 430
status 3 (db_gone): 16
status 4 (db_redir_temp): 2
status 5 (db_redir_perm): 50
status 7 (db_duplicate): 5
CrawlDb statistics: done


Finally we can also dump the whole content of the crawlDB into a text file for further examination:


./nutch readdb ~/tescobank/crawldb/ -dump /tmp/dumpCrawl


As we saw previously, the crawl directory also contains a number of segment directories with the following subdirectories :


~/tescobank/segments/20150904152610/content/
~/tescobank/segments/20150904152610/crawl_fetch/
~/tescobank/segments/20150904152610/crawl_generate/
~/tescobank/segments/20150904152610/crawl_parse/
~/tescobank/segments/20150904152610/parse_data/
~/tescobank/segments/20150904152610/parse_text/


Again, all these contain part-* files. The content of a segment can be explored with the command ‘./nutch readseg’. A segment contains the data for a round of fetching, these subdirectories are generated by the various steps as we will see right now.

How Nutch works -  step by step



As we mentioned previously, Nutch crawls in sequence of batch steps. Each of these steps can be ran manually using the nutch script but the crawl script simply combines these commands for you in a convenient fashion.


First there is an injection step. This takes the seed file as input and creates (or updates) a crawldb directory. We then do a number of rounds where we generate a segment by selecting from the crawldb the URLs which are eligible for fetching; this populates the crawl_generate subdirectory of the segment. We then fetch the content which creates the crawl_fetch and content subdirectories, then parse the fetched content. This extract the text of the webpages, some metadata and often discovers links to potentially new web pages. The following step is to update the crawldb with these newly discovered URLs as well as update the information we have about the URLs we just fetched.


There are other steps involved in a round of fetching, such as the link inversion (to produce the linkDB), deduplication and of course the indexing, where we sent the documents to CloudSearch.


The crawl script keeps generating new segments until no URLs are eligible for fetching, in which case it returns.

Going distributed



As mentioned earlier, Nutch has a rich set of features and there are many ways in which you could take it further when you start experimenting with your own crawls. One possible thing would be to create additional search fields and populate them from metadata extracted from the documents, see [https://wiki.apache.org/nutch/IndexMetatags] for pointers on how to achieve that.


As your crawls will get larger or if you start running Nutch in production, you will certainly need to run it in pseudo (or fully) distributed mode. What this means is that instead of running in local mode, the Nutch jobs will be deployed to a Hadoop cluster either consisting of a single machine running all the services (pseudo-distributed) or several ones.


There are multiple benefits to doing this, mainly that the larger jobs will be split into tasks running in parallel. It will also be easier to check the logs as they will be organised per job and task and you will also get interesting insights into the behaviour of your crawls with the counters available for each job. Finally, it will also make the way Nutch works more explicit and you should gain a better understanding of how the various batch jobs articulate.


Hopefully I have convinced you to give the pseudo-distributed mode a try. Here are the steps to follow for doing this.


Download Hadoop 2.4.1 which is the version used by Nutch as of writing from


Once this is done, you should be able to see the NameNode UI on http://localhost:50070/ and the YARN UI on http://localhost:8088/.


We then need to add the Hadoop commands to the path with :


export PATH=$PATH:/usr/local/bin/hadoop-2.4.1/bin


Now let’s see how to run Nutch. First we’ll copy the seed file we created earlier to HDFS with


hadoop fs -mkdir /tescobank
hadoop fs -copyFromLocal ~/tescobank/seed /tescobank


we can then check the content of that file on HDFS with :


hadoop fs -text /tescobank/seed


Let’s edit the content of the files nutch-site.xml, regex-urlfilters.txt and regex-normalize.xml as we did previously but this time we do so in $NUTCH_HOME/conf/ and not in runtime/local/conf. The reason for this is that in deployed mode we have to generate a job archive containing all the classes, resource files and dependencies with the command ‘ant clean runtime’.


If you are feeling curious, you could have a peek at the content of the job file you just generated in runtime/deploy/apache-nutch-1.11-SNAPSHOT.job.


Now let’s go to the directory runtime/deploy, as you see it contains only the job archive and the script we already used in /bin.


We can start the crawl with


runtime/deploy/bin/crawl --index /tescobank/seed /tescobank -1


Please note that the paths are different from when we ran in local mode and point to the locations on HDFS.


The console will display various logs as the crawl progresses but you should now be able to see the job information on http://localhost:8088/ as shown below.


Hadoop.png
Hadoop application UI


Each individual job can be displayed, as we can see here with a fetch task, where the status gets constantly updated and provides useful clues on the behaviour of the crawler.


hadoop-job.png
Hadoop Job UI
You can also get the logs for a particular job and its counters, as shown below.


hadoop-counters.png
Job counters 


Running in distributed mode adds some overhead compared to using Nutch in local mode, however the benefits it provides largely outweighs the drawbacks.


Now that we have seen how to install, configure and run Apache Nutch in both local and distributed mode, let’s see how we can achieve the same goals using StormCrawler.

StormCrawler

Presentation



StormCrawler (https://github.com/DigitalPebble/storm-crawler) is an open source project under Apache License which provides a collection of resources for building scalable, low-latency web crawlers running on Apache Storm. It is often described as a SDK and it requires some minimal programming as we will see below.


Unlike Hadoop which is batch-driven, Storm is a real-time stream processing platform which has become very popular in recent years. It is both scalable and reliable and is based on simple yet powerful concepts. Put it simply, a Storm pipeline is called a topology. A topology is a graph of spouts and bolts that are connected with stream groupings. Spouts emit the tuples in the first place, while bolts process them.
Storm concepts : spouts, streams, bolts and tuples
What StormCrawler provides is a set of spouts and bolts that can be combined to build a web crawler, as well as various utilities and resources as we will see below. The project is very modular and distinguishes between the core components (which any StormCrawler topology would need) and external modules, such as the AWS module containing a bolt for indexing with CloudSearch or the SQL one which we will use in this tutorial.


One of the main differences between Hadoop and Storm is that a Storm topology runs continuously whereas a MapReduce job runs only for the time it takes to process its input. Unlike Nutch which does things with separate batch steps as we’ve seen previously, StormCrawler does everything i.e. fetching, parsing, indexing etc… at the same time.


Now let’s see how to set it up to crawl the TescoBank website.

Prerequisites



The instructions below are based on a Linux distribution. You will need to install the following softwares :


You will need an AWS account and configure the credentials as you did for the Nutch tutorial.

Installation



The code and resources for this tutorial can be found on [https://github.com/DigitalPebble/tescobank]. Please download the files from [https://github.com/DigitalPebble/tescobank/archive/master.zip] and unzip to the directory of your choice or alternatively clone the git repository to your local disk.

MySQL



Unlike Nutch which relies on Hadoop data structures stored on HDFS, StormCrawler connects to external data sources. Depending on the use case, these data sources will be queues (like AWS SQS or RabbitMQ) or databases. For this tutorial we will use a MySQL table to store the status of the URL, in a similar fashion to the crawldb in Nutch (see above).


After you’ve installed Mysql, you can create a database and a user then define a table that will be used by our topology :


CREATE DATABASE crawl;
CREATE USER 'tesco'@'localhost' IDENTIFIED BY 'bank';
GRANT ALL PRIVILEGES ON crawl.tescobank TO 'tesco'@'localhost' IDENTIFIED BY PASSWORD 'bank' WITH GRANT OPTION;
FLUSH PRIVILEGES;


CREATE TABLE tescobank (
url VARCHAR(512),
status VARCHAR(16) DEFAULT 'DISCOVERED',
nextfetchdate TIMESTAMP DEFAULT CURRENT_TIMESTAMP,
metadata TEXT,
bucket SMALLINT DEFAULT 0,
PRIMARY KEY(url)
);


CloudSearch



The Tescobank repository contains a script (createCSDomain.sh) for creating a CloudSearch domain. As with the Nutch tutorial, please run this script and take note of the value of the Document Endpoint so that you can configure the StormCrawler topology to index documents to it.


Once the domain is created, you should see the fields below :


storm-fields.png
CloudSearch indexing for StormCrawler

StormCrawler



The resources required by this tutorial (SQL, CloudSearch) are in the version 0.6 of StormCrawler which was released on 3rd Sept 2015. These dependencies are declared in the pom file located in the tescobank repository.


We need to write the resources for building a web crawler with StormCrawler. Thanks to StormCrawler’s modular nature, this means having :


  • a Java class extending ConfigurableTopology : this will specify which components to put together for building the crawl
  • a YAML configuration file : used by ConfigurableTopology  to build a configuration object from a file
  • a set of resources : URLFilters, ParseFilters and their configurations
  • a pom file for building with Maven and declaring the dependencies


We will use Maven to build a Jar file containing the Java class, the dependencies and resource files. Unlike Nutch, there is no need to download and compile the entire source code. Everything is managed as Maven dependencies and we can just focus on the custom parts of the crawler. This also makes it easier to upgrade the versions of StormCrawler, whereas with Nutch you would have to merge the changes from the Nutch release back into your codebase.

Description of the pipeline



Our crawl topology combines components from various modules :
  • core : URLPartitionerBolt, SimpleFetcherBolt, SiteMapParserBolt and StatusStreamBolt
  • tika : ParserBolt
  • cloudsearch : CloudSearchIndexerBolt
  • sql : SQLSpout and StatusUpdaterBolt


The class implementing the topology can be found in src/main/java/com/digitalpebble/stormcrawler/CrawlTopology.java. It declares which spouts and bolts are to be used by the topology.


Our topology is quite straightforward. The SQLSpout pulls the URLs due for fetching from the MySQL table and passes them to the URLPartitionerBolt, which creates a new key field based on the hostname of the URL and uses it to distribute the tuples to the SimpleFetcherBolt. The latter fetches the content of the URLs and sends tuples to the SiteMapParserBolt. If the content is not a Sitemap file then the tuple is simply transferred to the ParserBolt. The parser bolt extracts text and metadata from the binary content. Later on the CloudSearchIndexerBolt sends documents to index to CloudSearch.


As you have probably noticed our topology uses two types of streams : the default one for handling the content of a URL (fetching / parsing / indexing) and another one called status which is used to communicate with the external storage (our MySQL table) and update or create information about the URLs. You can find more information about status streams on the corresponding WIKI page. The StatusUpdaterBolt  is the final piece of the jigsaw and sends updates about the URL status to the SQL table, like for instance creating a new row for a newly discovered URL or changing the value of the nextfetchdate field based on the status of the URL (e.g. DISCOVERED, FETCHED etc...).


Note : the URLPartitionerBolt is not really needed for this particular use case as the crawl is limited to a single host, we could have connected the SimpleFetcherBolt straight into the SQLSpout. I chose to include it to show how it can be used for larger crawls as URLs from the same host or domain need to be directed to the same instance of the FetcherBolt so that it can enforce politeness.

Configuration



The file crawler-conf.yaml contains the configuration of the StormCrawler components. This is where you will need to specify the value of cloudsearch.endpoint in particular. The WIKI contains a page describing the common configuration elements.


Some of the key values will look familiar like the agent name ones, their semantic is the same as in Nutch. You should not need to modify any other values for the crawl topology to work.

Custom resources



Just as we did for Nutch, we need to control the expansion of our crawl. This is done with the file src/main/resources/tesco.urlfilters.json which declares the order in which the filters must be used and how they should be configured. One important difference between Nutch and StormCrawler is that the former distinguishes between filters and normalisers whereas the latter merges both concepts into a single one. This is a lot more flexible in practice as it gives more control on how the various steps can be combined. There are two different resources for the regex-based filtering and normalisation though (RegexURLNormalizer and RegexURLFilter), whose format is exactly the same as in Nutch, however from a conceptual point of view both are implementations of URLFilter.


All the resources defined in the urlfilters.json file should be easy to understand, except maybe from RobotsFilter which has no equivalent in Nutch. It simply loads the robots directive in memory and applies them as a filter, which is far more efficient than adding them to the crawldb in Nutch only to discard them at fetch time!


URLFilters are used by the FetchBolt when dealing with redirections and both the ParserBolt and SitemapParserBolt to discard newly discovered URLs.


Another important file is src/main/resources/tesco.parsefilters.json which lists the ParseFilters to be applied during the parsing step. This is typically used to scrape information from webpages, in our case it is pretty straightforward :


{
 "com.digitalpebble.storm.crawler.parse.ParseFilters": [
   {
     "class": "com.digitalpebble.storm.crawler.parse.filter.XPathFilter",
     "name": "XPathFilter",
     "params": {
       "canonical": "//*[@rel=\"canonical\"]/@href",
       "description": [
           "//*[@name=\"description\"]/@content",
           "//*[@name=\"Description\"]/@content"
        ]
     }
   },
   {
     "class": "com.digitalpebble.storm.crawler.parse.filter.ContentFilter",
     "name": "ContentFilter",
     "params": {
       "pattern": "//DIV[@id=\"maincontent\"]"
      }
   }
 ]
}


We simply use XpathFilter to extract the values of the canonical and description tags, which will be kept in the metadata and used during the indexing (see the values of indexer.md.mapping in the configuration file). As of writing, Nutch does not have a generic plugin for extracting data with XPath but there is work in progress in NUTCH-1870, neither does it have an equivalent of the ContentFilter. The ContentFilter allows to restrict the main text of the document to the section covered by the XPath pattern given in the configuration. This is a very useful way of removing the boilerplate as many sites use specific tags for that purpose.


You may wonder why both configuration files for the URLFilters and ParseFilters are called tesco.*.json,  the answer is simply that we declared these names to be used in the main config file :


parsefilters.config.file: "tesco.parsefilters.json"
urlfilters.config.file: "tesco.urlfilters.json"


You can of course chose the name of your choice. If these are omitted from the configuration file then the default files urlfilters.json and parsefilters.json inherited from the core storm-crawler modules will be used.

Compilation



Now that we have defined our topology class, the custom resources and the configuration file, the last element is the pom.xml file which allows us to compile the project with Apache Maven. This is done by simply executing  ‘mvn clean install’ on the command line. This will download the dependencies, compile the code and get everything packaged for us in a neat jar file, resources included (BTW if you are feeling curious, why not have a look at the content of the file target/stormcrawler-tescobank-0.1-SNAPSHOT.jar?).


The pom file is very straightforward and declares the various modules (core, sql, etc...) that we need in our topology.

Running the crawl



We are almost good to go. The only remaining task is to add a seed to our MySQL table.


INSERT INTO tescobank (url, metadata) VALUES ("http://www.tescobank.com/sitemap.xml","isSitemap=true");


As you can see we are using a bespoke metadatum (isSitemap=true) which is used by the SitemapParserBolt.


We can now start the crawl with the following command :


`mvn exec:java -Dexec.mainClass=com.digitalpebble.stormcrawler.CrawlTopology -Dexec.args="-conf crawler-conf.yaml -local`


This will work even if you haven’t installed Storm, however if Storm is installed you can do the same with :


`storm jar target/stormcrawler-tescobank-0.1-SNAPSHOT.jar com.digitalpebble.stormcrawler.CrawlTopology -conf crawler-conf.yaml -local`


Removing the -local parameter will run the topology in deployed mode as we will see later on.


Unlike Nutch, StormCrawler runs continuously and the topology will not stop at the end of the crawl. You should be able to see when it has finished by looking at the logs on the console or by querying MySQL with :


select count(*) from tescobank where status='discovered';


The graph below comes from the monitoring section of the CloudSearch web UI and is a good illustration of how StormCrawler differs from Nutch. As you can see documents are continuously being added to the index instead of being processed by batch.


indexSC.png
Timeline of indexing with StormCrawler
The whole process took roughly 26 minutes (vs 35 minutes for Nutch).


Going further


As explained above, you could set up a Storm cluster on your machine (see instructions on https://storm.apache.org/documentation/Setting-up-a-Storm-cluster.html) and launch the crawl in deployed mode by using the ‘storm’ command and removing the ‘-local’ option from the command line. This will submit the topology to the Storm cluster and return straight away.


The Storm UI (http://localhost:8080) should display the crawl topology as illustrated below.

storm1.png
Storm UI

Clicking on the topology name takes you to the topology page.


storm2.png
Topology UI
This page contains some very useful information about the performance of each component of the topology. As expected the fetch bolt takes most of the time (3.6 seconds on average per tuple), which, given that we specified a 2-second delay between HTTP requests, probably means that the actual fetching of a page takes on average 1.6 seconds.


Beside the Storm UI, we now have separate files for the logs (see worker-*.log files in the log directory of your Storm setup) and the metrics (see metrics.log). The latter was triggered by the use of the line

      conf.registerMetricsConsumer(LoggingMetricsConsumer.class);

in our Topology class. We can see for instance entries such as  


4:fetch       fetcher_average         {bytes_fetched=59436.0, fetch_time=1741.6666666666667}
4:fetch       fetcher_average         {bytes_fetched=60339.75, fetch_time=1872.25}
4:fetch       fetcher_average         {bytes_fetched=58915.5, fetch_time=1843.5}
4:fetch       fetcher_average         {bytes_fetched=58012.333333333336, fetch_time=2030.0}


which give us the average number of bytes and time spent retrieving the content over the sampling period. These figures tend to confirm our observation above that the fetch time itself takes a substantial amount of time.


One of the great features of Apache Storm is that the metrics mechanism is completely pluggable and users can implement backend for their favourite metrics system (like AWS CloudWatch for instance).

Conclusion : Sumo vs Ninja



Hopefully this tutorial helped you gain a better understanding of how to use Nutch or StormCrawler to index web pages into AWS CloudSearch, and also how these two projects differ.


Both tools have their advantages and slight drawbacks and it is a matter of determining which one is best suited for your particular use case. The one we chose for this tutorial was a very basic one and either tool can be configured further to extract more specific information. On the whole, StormCrawler is probably a bit more versatile and it can be used more easily than Nutch, for instance when dealing with URLs coming as a stream (e.g. generated by some user interaction). Doing it with Nutch would be doable but definitely less straightforward.


One of the main differences is that StormCrawler is a SDK : you need to take care of the storage yourself (although there are loads of resources already available that you can reuse), whereas Nutch 1.x does not need any external resources and leverages Hadoop's datastructures on HDFS.


Latency is also a key element in favour of StormCrawler. As we’ve seen above with the graphs showing when the documents were indexed in CloudSearch, the stream processing nature of StormCrawler is definitely easier than Nutch’s batch processed. Another example of how this can have an impact is when dealing with sites using sessions with a short TTL. With Nutch, you get little control as to when URLs actually get fetched.


Performance-wise, Storm probably has a more optimal utilisation of the hardware as it uses the network, disks and CPU all at the same time whereas Nutch is limited by the batches and for instance does not fetch when it is on another step (e.g. generating / parsing / updating or indexing). We can expect StormCrawler to be usually faster than Nutch but probably not by such a large margin as reported (26 vs 35 minutes), as Nutch could have been made a bit faster e.g. by parsing while fetching and removing the unnecessary link reversion step from the crawl script. I chose to keep those to make the tutorial as fluid as possible.


In terms of features both projects have their pros and cons. For instance Nutch can deduplicate documents (SC currently can’t) while StormCrawler uses the canonical tag when indexing. Nutch can handle deletions of gone pages whereas StormCrawler currently only adds content. As we’ve seen above, StormCrawler can handle sitemaps and filter based on robots directives, it also has better support for Xpath extraction, whereas Nutch will soon be getting a new web UI and rest endpoints, etc… It would be tedious to go into an exhaustive list of their differences, I will just mention two more, namely that Nutch can do continuous crawls as well as one-off ones, whereas StormCrawler runs exclusively in a continuous manner. Finally Nutch has been used and tested on an extremely large scale whereas with StormCrawler the scalability depends on what data backend you will use and needs more fine tuning than Nutch.


There are also more subjective ways in which to determine which of these two projects is the most suited to your use case : which one is easier to build, deploy and monitor? Which one is easier for beginners to understand? Which one would fit better in your overall architecture?


Nutch and StormCrawler also have a lot in common (including some of the committers like myself). Both are under Apache license and have active communities. Nutch certainly has a larger user base but StormCrawler is definitely gaining adoption. They also both use and contribute to libraries such as crawler-commons and as such benefit from each other's improvements. Many components and concepts in StormCrawler were initially taken from Nutch and conversely some improvements in StormCrawler got contributed back to Nutch.


I hope that you have found this tutorial useful and that we will soon count you amongst the regular users of Nutch and StormCrawler. Happy crawling!

Friday, 4 September 2015

What's new in Storm-Crawler 0.6

We have just released version 0.6 of Storm-Crawler, an open source web crawling SDK based on Apache Storm. Storm-Crawler provides resources for building scalable, low-latency web crawlers and is used in production at various companies.

We have added loads of improvements and bug fixes since our previous release last June, thanks to the efforts of the community. The activity around the project has been very steady and a new committer (Jorge Luis Betancourt) has joined our ranks. We also had contributions from various users, which is great.

Here are the main features of version 0.6.

Dependencies upgrades

  • Storm 0.9.5
  • crawler-commons 0.6
  • Tika 1.10

Code reorganisation

  • Organise external content as separate sub-modules #145
  • Removed external/metrics #160

API changes

  • ParseFilter from interface to abstract class #159
  • Parse can output more than one document #135

New features and resources

  • SimpleFetcherBolt  enforces politeness #181
  • New RobotsURLFilter #178
  • New ContentFilter to restrict text of document to XPath match #150
  • Adding support for using the canonical URL in the IndexerBolts #161
  • Improvement to SitemapParserBolt #143
  • Enforce robots meta instructions #148
  • Expand XPathFilter to accept a list of expressions as an argument #153
  • JSoupParserBolt does a basic check of the content type #151

External resources


The external (non-core) resources have been separated into discrete sub-modules as their number was getting larger. 

SOLR
Our brand new module for Apache SOLR (see #152) is comparable to the existing ElasticSearch equivalent and provides an IndexerBolt, a MetricsConsumer and a SOLRSpout and StatusUpdaterBolt.

SQL
Not all web crawls require scalable big data solutions. I conducted a survey of Apache Nutch users some time ago which showed that most people used it on a single machine and less than a million URL. These are often people crawling a single website. With that in mind, we added a spout and StatusUpdaterBolt implementations to use MySQL as a storage for URL status which is useful for small recursive crawls. See #172 for details.

AWS CloudSearch
There is also a new AWS module containing an IndexerBolt for Amazon CloudSearch (see #174). 



We hope that people find these improvements useful and would like to thank all users and contributors.


Friday, 5 June 2015

What's new in Storm-Crawler 0.5



We've just released the version 0.5 of Storm-Crawler, just over three months after the previous one. As you can read below, we've been pretty busy! The project got some great contributions from new users and is seeing an increase in adoption, which is very encouraging.

Metadata and Outlinks


One of the main improvements provided in the new release is the introduction of a Metadata object which replaces the Map<String,String[]> that were used everywhere in our code as well as the KeyValues utility class which manipulated such Maps. This makes the code a lot simpler and more elegant.

A new MetadataTransfer class has been added to (a)  determine what metadata should be kept e.g. when persisting the information about a URL in a StatusUpdaterBolt but also to (b) determine what metadata should be transferred from the source document to its outlinks. This is a very useful feature that gets used quite often in practice.

Speaking of outlinks, they now have a proper class for representing them where the anchor and metadata for a given target URL are kept. Note that the parser bolts populate the metadata using the MetadataTransfer class described above prior to passing them to the ParseFilters. This means that a given ParseFilter can modify the outlinks for a given page or create completely new ones.


JSoupParserBolt

We got a present from our committer Gui whose company have kindly donated the a parsing bolt based on JSoup. This is now the one we use by default, the one based on Tika has been moved to the external part of the code. If you are crawling non-HTML pages then you should be using the Tika-based parser, otherwise the JSoup one is a lot lighter (both in code and dependencies) and works better when extracting data with XPath.

Abstract classes for persistence

We also added many useful resources for writing recursive crawlers, in addition to the status stream that came with the previous release. These can be found in the com.digitalpebble.storm.crawler.persistence  package. In particular, we added a new AbstractStatusUpdaterBolt class. As the name suggests, this is meant to be extended to store the tuples coming from the status stream into some sort of storage (e.g. Elasticsearch, SOLR, Cassandra, HBase etc...). The abstract class keeps an internal cache for newly discovered URLs so that the same URL does not get updated more than once in the backend. Obviously this cache would not outlive the bolt if it died so this should be seen merely as an optimization and not a 100% reliable filter. The abstract class then calls a Scheduler, which is a pluggable mechanism to define when a given URL should be fetched next based on its metadata and status. The default scheduler simply relies on the configuration set by the user.

We also added a new AbstractIndexerBolt class, to simplify writing indexing bolts by allowing the users to specify what metadata to index via the configuration. This greatly simplifies writing an IndexerBolt.



Elasticsearch

These new classes above have been used for our Elasticsearch bolts and spout. We now have :
These 3 components allow to build a recursive crawler with Elasticsearch. We also added an example topology to illustrate how to do this as well as an init script which defines the schemas of the indices.

As a bonus we wrote a MetricsConsumer which can be plugged into the Storm metrics mechanism so that they get indexed in Elasticsearch. This would be typically used by Kibana as a way of monitoring the performance of the crawler with the metrics generated by the spouts and bolts e.g. bytes per second, pages fetched etc... I had suggested it to the elasticsearch-hadoop community but it hasn't attracted much interest so far.

We will probably provide a schema file for Kibana so that users can load a standard dashboard for displaying the metrics. We just need to wait for the next release of Kibana which will contain #1552.

Miscellaneous and next steps

We've replaced the old http protocol implementation we'd borrowed from Nutch with a brand new one based on Apache HttpClient. Less code to maintain and it is also more robust, particularly on https pages.


Apart from that, we improved our WIKI pages, upgraded some dependencies (Tika to 1.8, ES to 1.5.1, Storm to 0.9.4), added some resources (e.g. MaxDepthFilter), removed some deprecated ones (#126) and fixed numerous bugs. 



As I said, we've been pretty busy and it looks like this is set to continue with the 0.6 release. It will probably contain #117 as well as resources for Apache SOLR.

Thanks to everyone who contributed to this release in any way.


Wednesday, 28 January 2015

What's new in Storm-Crawler 0.4

We've recently released the version 0.4 of storm-crawler, which is a collection of resources for building low-latency, large scale web crawlers with Apache Storm

The project has been really active in the last few months, thanks partly to our 2 fantastic new committers (Jake Dodd and Gui Forget) and as a result contains some important changes and improvements.

Reorganisation of the code

We've separated the project into two separate modules named 'core' and 'external'. External  contains resources that are either specific to a given library, for instance the ElasticSearchBolt that can be used to index documents with ElasticSearch, or very generic, like our metrics related code. This simplifies the code and dependencies for the core components and makes the project easier to understand.

There are also external resources contributed by third parties, as well as a separate project (still in its infancy) which will illustrate the use of storm-crawler and provide a ready-to-use generic web crawler; whereas storm-crawler itself will remain a SDK.

We also generate a test jar and dependencies for the core module, containing code that can be reused for testing various resources.

Status stream

The main components of the SDK now send tuples not only to the standard stream but also to a separate 'status' stream, which is meant to be consumed by a bespoke bolt in charge of persisting the status and metadata for the known URLs of a crawl. This is useful for recursive crawls, where new URLs are discovered during the lifetime of the topology but also for non-recursive ones e.g. for managing redirections, errors, etc...

This is used by components such as the FetcherBolt (redirections), the ParserBolt (outlinks) or the brand new SiteMapParserBolt (outlinks - see below) , in particular to handle errors, be them temporary or not. The component in charge of storing the status of the URL can then decide when a URL should be refetched or change its status, which is a better approach than failing the URL and simplifies the code for the Spouts.

The default stream is used primarily for the main content of a URL when it is successfully fetched and parsed, typically to send it to an index on ElasticSearch or SOLR (or anything else you fancy), whereas the information of the URLs (think about the crawldb if you come from Apache Nutch) can be stored somewhere else like HBase or Cassandra.

Interface changes

We made some of the interfaces a bit richer. The Protocol interface can now receive the metadata associated with a URL. The ParseFilters can be configured with the Storm config and the URLFilter interface has access to the source URL and its metadata, which is useful for instance to filter based on the host or domain name of the source URL (see below).

New resources

Apart from the usual upgrades of dependencies, we've also added the following resources :
This release contains also several bug fixes and various other improvements.

What next?

The next release should contain the introduction of a Metadata object to replace the Map<String,String[]> that are used everywhere in our code and combine it with KeyValues.

We'll probably add some code to make it easier for people to write bolts reading from the status stream.

I expect there will be more external resources (like a MetricsConsumer to send metrics directly to ElasticSearch), either in the external module or in spiderlet.


Friday, 28 November 2014

Generating a test corpus for Apache Tika from CommonCrawl : Behemoth to the rescue!

It's been a while since I last blogged, in particular about Behemoth.  For those who don't know about it, Behemoth is an open source project under Apache license which helps with large scale processing of documents by providing wrappers for various libraries (Tika, UIMA, GATE etc...), a common document representation used by these wrappers and some utility classes for manipulating the dataset generated by it. Behemoth runs on Hadoop and has been used in various projects over the years. I have started working on an equivalent for Apache Spark called Azazello (to continue with the same litterary reference) but it is still early days.

I have been using Behemoth in the last couple of days to help with TIKA-1302. What we are trying to do there is to have as large a test dataset as possible for Tika. We thought it would be interesting to use data from Common Crawl, in order to get (1) loads of it (2) things seen in the wild (3) various formats. 

Behemoth steps

Luckily Behemoth can process WARC files such as the ones generated by Common Crawl with its IO module. Assuming you have cloned the source code of Behemoth, compiled it with Maven and have Hadoop installed all you need to do is call : 

hadoop jar io/target/behemoth-io-*-SNAPSHOT-job.jar com.digitalpebble.behemoth.io.warc.WARCConverterJob -D fs.s3n.awsAccessKeyId=$AWS_ACCESS_KEY -D fs.s3n.awsSecretAccessKey=$AWS_SECRET_KEY -D document.filter.mimetype.keep=.+[^html]  s3n://aws-publicdatasets/common-crawl/crawl-data/CC-MAIN-2013-20/segments/1368696381249/warc/CC-MAIN-20130516092621-00099-ip-10-60-113-184.ec2.internal.warc.gz behemothCorpus

Please note the document.filter.mimetype.keep=.+[^html] parameter, this allows us to filter the input documents and keep only the ones that do not have html in their mimetype (as returned by the web servers).

The command above will generate a Hadoop sequence file containing serialized BehemothDocuments. The reader command can be used to have a peek at the content of the corpus e.g.

./behemoth reader -i behemothCorpus -m | more

url: http://0.static.wix.com/dicons/7ffb03_2f63cf23ec1107e4ed9824f6c98e5847.wix_doc_ico
contentType: image/jpeg
metadata: 
Date: Tue, 21 Oct 2014 08:46:31 GMT
ETag: "6afff623058a88cb23a5b18c934ee8fd19192"
Server: s23.tam
Content-Type: image/jpeg
Connection: close
Content-Length: 19192
Cache-Control: max-age=604800
X-Seen-By: s23.tam_pp
IP: 207.36.47.4

[...]

The option -m displays the metadata, we could also display the binary content if we wanted to. See WIKI for the options available.

The next step is to generate an archive with the content of each file, for which we have the generic exporter command :

./behemoth exporter -i $segName -n URL -o file:///mnt/$segName -b

This gives us a a number of archives with the content of each document put in a separate file, with the URL used for its name. We can then push the resulting archives to the machine used for testing Tika.

Scaling with Amazon EMR

The commands above will work fine even on a laptop but since we are interested in processing a substantial amount of data we need a real Hadoop cluster.

I started a smallish 5 nodes Hadoop cluster with EMR, SSHed to the master, git cloned Behemoth, compiled it and pushed the segment URLs from the latest release of Common Crawl into a SQS queue then wrote a small script which pulls the segment URLs from the queue one by one, calls the WARCConverterJob then the exporter before pushing the archives to the machine used for testing Tika. The latter step is a bit of a bottleneck as it writes to the local filesystem on the master node.

On a typical segment (like s3n://aws-publicdatasets/common-crawl/crawl-data/CC-MAIN-2014-42/segments/1413507444312.8/) we filtered 30,369,012  and kept 431,546 documents. The top mimetypes look like this : 


166208 contentType: image/jpeg
  63097 contentType: application/pdf
  58531 contentType: text/plain
  38497 contentType: image/png
  28906 contentType: text/calendar
  10162 contentType: image/gif
   7005 contentType: audio/x-wav
   6604 contentType: application/json
   3136 contentType: text/HTML
   2932 contentType: unknown/unknown
   2799 contentType: video/x-ms-asf
   2609 contentType: image/jpg
   1868 contentType: application/zip
   1798 contentType: application/msword

The regular expression we used to filter the html documents did not take the uppercase variants into account : nevermind, it still removed most of them. 

What next?

One alternative to pushing the archives to an external server would be to run the tests with Behemoth, since it has an existing wrapper for Tika. This would make the tests completely scalable and we'd also be able to use the extra information available in the BehemothDocuments such as the mime-type returned by the servers.

We'll see how this dataset gets used in TIKA-1302There are many ways in which Behemoth can be used and it has quite a few modules available. The aim of this blog was to show how easy it is to process data on a large scale with it, with or without the CommonCrawl dataset.

By the way CommonCrawl is a great resource, please support it by donating if you can (http://commoncrawl.org/donate/).